In the branded theme the home page has an image under the logo in the header, therefore the logo needs to be white. On the sub pages of the theme the header is white and I would like to use our color logo. When I change the logo in site identity it changes the logo in both locations.
When I uploaded the file to Elements by editing the element that was there it did not change the logo to the transparent version. The display rule shows the location to be front page.
I tried changing it to the home page, but this changed the formatting of the home page to the look of the sub pages.